Halopiger xanaduensis gen. nov., sp. nov., an extremely halophilic archaeon isolated from saline Lake Shangmatala in Inner Mongolia, China

Int J Syst Evol Microbiol. 2007 Jul;57(Pt 7):1402-1407. doi: 10.1099/ijs.0.65001-0.

Abstract

Strain SH-6(T) was isolated from the sediment of Lake Shangmatala, a saline lake in Inner Mongolia (China). Cells were pleomorphic. The organism was neutrophilic and required at least 2.5 M (15 %) NaCl, but not MgCl(2), for growth; optimal growth occurred at 4.3 M (25 %) NaCl. The G+C content of its DNA was 63.1 mol%. 16S rRNA gene sequence analysis revealed that strain SH-6(T) is a member of the family Halobacteriaceae, but there was a low level of similarity with other members of this family. Highest sequence similarity (94.6 %) was obtained with the 16S rRNA genes of the type strains of Natronolimnobius innermongolicus and Natronolimnobius baerhuensis. Polar lipid analyses revealed that strain SH-6(T) contains phosphatidylglycerol and phosphatidylglyceromethylphosphate, derived from both C(20)C(20) and C(20)C(25) glycerol diethers together with the glycolipid S(2)-DGD-1. On the basis of the data obtained, the new isolate could not be classified in any recognized genus. Strain SH-6(T) is thus considered to represent a novel species in a new genus within the family Halobacteriaceae, order Halobacteriales, for which the name Halopiger xanaduensis gen. nov., sp. nov. is proposed. The type strain of Halopiger xanaduensis is SH-6(T) (=CECT 7173(T)=CGMCC 1.6379(T)=JCM 14033(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition
  • China
  • DNA, Archaeal / chemistry
  • DNA, Archaeal / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Genes, rRNA
  • Geologic Sediments / microbiology*
  • Halobacteriaceae / chemistry
  • Halobacteriaceae / classification*
  • Halobacteriaceae / isolation & purification*
  • Halobacteriaceae / physiology
  • Magnesium Chloride / metabolism
  • Microscopy, Phase-Contrast
  • Molecular Sequence Data
  • Phospholipids / analysis
  • Phylogeny
  • RNA, Archaeal / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Sodium Chloride / metabolism

Substances

  • DNA, Archaeal
  • DNA, Ribosomal
  • Phospholipids
  • RNA, Archaeal
  • RNA, Ribosomal, 16S
  • Magnesium Chloride
  • Sodium Chloride

Associated data

  • GENBANK/AM268114