Microbial community biofabrics in a geothermal mine adit

Appl Environ Microbiol. 2007 Oct;73(19):6172-80. doi: 10.1128/AEM.00393-07. Epub 2007 Aug 10.

Abstract

Speleothems such as stalactites and stalagmites are usually considered to be mineralogical in composition and origin; however, microorganisms have been implicated in the development of some speleothems. We have identified and characterized the biological and mineralogical composition of mat-like biofabrics in two novel kinds of speleothems from a 50 degrees C geothermal mine adit near Glenwood Springs, CO. One type of structure consists of 2- to 3-cm-long, 3- to 4-mm-wide, leather-like, hollow, soda straw stalactites. Light and electron microscopy indicated that the stalactites are composed of a mineralized biofabric with several cell morphotypes in a laminated form, with gypsum and sulfur as the dominant mineral components. A small-subunit rRNA gene phylogenetic community analysis along the stalactite length yielded a diverse gradient of organisms, with a relatively simple suite of main constituents: Thermus spp., crenarchaeotes, Chloroflexi, and Gammaproteobacteria. PCR analysis also detected putative crenarchaeal ammonia monooxygenase subunit A (amoA) genes in this community, the majority related to sequences from other geothermal systems. The second type of speleothem, dumpling-like rafts floating on a 50 degrees C pool on the floor of the adit, showed a mat-like fabric of evidently living organisms on the outside of the dumpling, with a multimineral, amorphous, gypsum-based internal composition. These two novel types of biofabrics are examples of the complex roles that microbes can play in mineralization, weathering, and deposition processes in karst environments.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Bacteria / metabolism*
  • Bacterial Physiological Phenomena*
  • Chloroflexi / classification
  • Chloroflexi / genetics
  • DNA / metabolism
  • Ecosystem*
  • Genes, rRNA
  • Geologic Sediments / chemistry
  • Geologic Sediments / microbiology*
  • Hot Springs / microbiology*
  • Mining
  • Polymerase Chain Reaction
  • Temperature
  • Thermus / classification
  • Thermus / genetics
  • Water Microbiology*

Substances

  • DNA