Jannaschia donghaensis sp. nov., isolated from seawater of the East Sea, Korea

Int J Syst Evol Microbiol. 2007 Sep;57(Pt 9):2132-2136. doi: 10.1099/ijs.0.65026-0.

Abstract

A Gram-negative, non-motile and rod-, oval- or coccoid-shaped strain, DSW-17(T), was isolated from seawater of the East Sea, Korea, and subjected to a polyphasic taxonomic study. Strain DSW-17(T) grew optimally at pH 7.0-8.0 and 25 degrees C. It contained Q-10 as the predominant ubiquinone and C(18 : 1)omega7c as the major fatty acid. Major polar lipids were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine and an unidentified glycolipid. The DNA G+C content was 65.2 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain DSW-17(T) was phylogenetically most closely affiliated to the genus Jannaschia. Strain DSW-17(T) exhibited 16S rRNA gene sequence similarity values of 96.5 % with the type strains of three recognized species of the genus Jannaschia. DNA-DNA relatedness data and differential phenotypic properties, together with the phylogenetic distinctiveness, demonstrated that strain DSW-17(T) is distinguishable from the recognized species of the genus Jannaschia. On the basis of phenotypic, phylogenetic and genetic data, strain DSW-17(T) was classified in the genus Jannaschia as a member of a novel species, for which the name Jannaschia donghaensis sp. nov. is proposed. The type strain is DSW-17(T) (=KCTC 12862(T)=JCM 14563(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • Carbohydrate Metabolism
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Genes, rRNA
  • Glycolipids / analysis
  • Hydrogen-Ion Concentration
  • Korea
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phospholipids / analysis
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Rhodobacteraceae / classification*
  • Rhodobacteraceae / genetics
  • Rhodobacteraceae / isolation & purification*
  • Rhodobacteraceae / physiology
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Temperature
  • Ubiquinone / analysis

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Glycolipids
  • Phospholipids
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Ubiquinone

Associated data

  • GENBANK/EF202612