Microbacterium sediminicola sp. nov. and Microbacterium marinilacus sp. nov., isolated from marine environments

Int J Syst Evol Microbiol. 2007 Oct;57(Pt 10):2355-2359. doi: 10.1099/ijs.0.65038-0.

Abstract

Two novel Microbacterium species are described on the basis of phenotypic, chemotaxonomic and genotypic studies. The two strains, designated YM10-847(T) and YM11-607(T), were isolated from river sediment and unidentified hydroid, respectively, of a marine lake. The strains were Gram-positive, catalase-positive bacteria with l-ornithine as the diagnostic diamino acid of the peptidoglycan. The acyl type of the peptidoglycan was N-glycolyl. The major menaquinones were MK-10 and MK-11 for YM10-847(T), and MK-11 and MK-12 for YM11-607(T). Mycolic acids were not detected. The DNA G+C content of strains YM10-847(T) and YM11-607(T) was 67.8 and 71.6 mol%, respectively. Comparative 16S rRNA gene sequence analysis revealed that the two strains belong to the genus Microbacterium. DNA-DNA relatedness data showed that YM10-847(T) and YM11-607(T) are two novel species of this genus. On the basis of these results, strains YM10-847(T) and YM11-607(T) represent two novel species of the genus Microbacterium, for which the names Microbacterium sediminicola sp. nov. and Microbacterium marinilacus sp. nov. are proposed. The type strains are YM10-847(T) (=MBIC08264(T)=DSM 18905(T)) and YM11-607(T) (=MBIC07778(T)=DSM 18904(T)), respectively.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinomycetales / chemistry
  • Actinomycetales / classification*
  • Actinomycetales / genetics
  • Actinomycetales / isolation & purification*
  • Bacterial Typing Techniques
  • Base Composition
  • Catalase / metabolism
  • Cell Wall / chemistry
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Genes, rRNA
  • Geologic Sediments / microbiology*
  • Japan
  • Molecular Sequence Data
  • Mycolic Acids / analysis
  • Nucleic Acid Hybridization
  • Ornithine / analysis
  • Peptidoglycan / chemistry
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Vitamin K 2 / analysis

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Mycolic Acids
  • Peptidoglycan
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • Ornithine
  • Catalase

Associated data

  • GENBANK/AB286020
  • GENBANK/AB286021