Structural mechanism of organic hydroperoxide induction of the transcription regulator OhrR

Mol Cell. 2007 Nov 30;28(4):652-64. doi: 10.1016/j.molcel.2007.09.016.

Abstract

The Xanthomonas campestris transcription regulator OhrR contains a reactive cysteine residue (C22) that upon oxidation by organic hydroperoxides (OHPs) forms an intersubunit disulphide bond with residue C127'. Such modification induces the expression of a peroxidase that reduces OHPs to their less toxic alcohols. Here, we describe the structures of reduced and OHP-oxidized OhrR, visualizing the structural mechanism of OHP induction. Reduced OhrR takes a canonical MarR family fold with C22 and C127' separated by 15.5 A. OHP oxidation results in the disruption of the Y36'-C22-Y47' interaction network and dissection of helix alpha5, which then allows the 135 degrees rotation and 8.2 A translation of C127', formation of the C22-C127' disulphide bond, and alpha6-alpha6' helix-swapped reconfiguration of the dimer interface. These changes result in the 28 degrees rigid body rotations of each winged helix-turn-helix motif and DNA dissociation. Similar effector-induced rigid body rotations are expected for most MarR family members.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics*
  • Crystallography, X-Ray
  • Gene Expression Regulation, Bacterial / drug effects*
  • Hydrogen Peroxide / pharmacology*
  • Models, Molecular
  • Molecular Sequence Data
  • Mutant Proteins / metabolism
  • Oxidation-Reduction / drug effects
  • Protein Structure, Secondary
  • Quorum Sensing / drug effects
  • Repressor Proteins / chemistry
  • Repressor Proteins / genetics*
  • Static Electricity
  • Structure-Activity Relationship
  • Substrate Specificity / drug effects
  • Transcription Factors / chemistry
  • Transcription Factors / genetics*
  • Tyrosine / metabolism
  • Xanthomonas campestris / drug effects
  • Xanthomonas campestris / genetics*

Substances

  • Bacterial Proteins
  • Mutant Proteins
  • Repressor Proteins
  • Transcription Factors
  • peroxide repressor proteins
  • Tyrosine
  • Hydrogen Peroxide

Associated data

  • PDB/2PEX
  • PDB/2PFB