Carbon dioxide activation at the Ni,Fe-cluster of anaerobic carbon monoxide dehydrogenase

Science. 2007 Nov 30;318(5855):1461-4. doi: 10.1126/science.1148481.

Abstract

Anaerobic CO dehydrogenases catalyze the reversible oxidation of CO to CO2 at a complex Ni-, Fe-, and S-containing metal center called cluster C. We report crystal structures of CO dehydrogenase II from Carboxydothermus hydrogenoformans in three different states. In a reduced state, exogenous CO2 supplied in solution is bound and reductively activated by cluster C. In the intermediate structure, CO2 acts as a bridging ligand between Ni and the asymmetrically coordinated Fe, where it completes the square-planar coordination of the Ni ion. It replaces a water/hydroxo ligand bound to the Fe ion in the other two states. The structures define the mechanism of CO oxidation and CO2 reduction at the Ni-Fe site of cluster C.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aldehyde Oxidoreductases / chemistry
  • Aldehyde Oxidoreductases / isolation & purification
  • Aldehyde Oxidoreductases / metabolism*
  • Anaerobiosis
  • Binding Sites
  • Carbon Dioxide / metabolism*
  • Carbon Monoxide / metabolism
  • Crystallization
  • Crystallography, X-Ray
  • Iron / chemistry
  • Iron / metabolism
  • Ligands
  • Multienzyme Complexes / chemistry
  • Multienzyme Complexes / isolation & purification
  • Multienzyme Complexes / metabolism*
  • Nickel / chemistry
  • Nickel / metabolism
  • Peptococcaceae / enzymology*
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism

Substances

  • Ligands
  • Multienzyme Complexes
  • Recombinant Proteins
  • Carbon Dioxide
  • Nickel
  • Carbon Monoxide
  • Iron
  • Aldehyde Oxidoreductases
  • carbon monoxide dehydrogenase

Associated data

  • PDB/3B51
  • PDB/3B52
  • PDB/3B53