Structures of human deoxycytidine kinase product complexes

Acta Crystallogr D Biol Crystallogr. 2007 Dec;63(Pt 12):1201-7. doi: 10.1107/S0907444907048834. Epub 2007 Nov 16.

Abstract

Human deoxycytidine kinase (dCK) is involved in the nucleotide-biosynthesis salvage pathway and has also been shown to phosphorylate several antitumor and antiviral prodrugs. The structures of dCK alone and the dead-end complex of dCK with substrate nucleoside and product ADP or UDP have previously been reported; however, there is currently no structure available for a substrate or product complex. Here, the structures of dCK complexes with the products dCMP, UDP and Mg2+ ion, and with dAMP, UDP and Mg2+ ion are reported. Structural comparisons show that the product complexes with UDP and a dead-end complex with substrate and UDP have similar active-site conformations.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Crystallography, X-Ray
  • Deoxycytidine Kinase / chemistry*
  • Deoxycytidine Kinase / genetics
  • Deoxycytidine Kinase / metabolism
  • Deoxycytidine Monophosphate / chemistry*
  • Deoxycytidine Monophosphate / genetics
  • Deoxycytidine Monophosphate / metabolism
  • Humans
  • Models, Molecular
  • Multiprotein Complexes / chemistry*
  • Protein Conformation
  • Recombinant Proteins / chemistry*
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Structure-Activity Relationship
  • Substrate Specificity
  • Uridine Diphosphate / chemistry*
  • Uridine Diphosphate / genetics
  • Uridine Diphosphate / metabolism

Substances

  • Multiprotein Complexes
  • Recombinant Proteins
  • Deoxycytidine Monophosphate
  • Uridine Diphosphate
  • Deoxycytidine Kinase