C/EBPbeta induces chromatin opening at a cell-type-specific enhancer

Mol Cell Biol. 2008 Mar;28(6):2102-12. doi: 10.1128/MCB.01943-07. Epub 2008 Jan 14.

Abstract

We have used the chicken mim-1 gene as a model to study the mechanisms by which transcription factors gain initial access to their target sites in compacted chromatin. The expression of mim-1 is restricted to the myelomonocytic lineage of the hematopoietic system where it is regulated synergistically by the Myb and CCAAT/enhancer binding protein (C/EBP) factors. Myb and C/EBPbeta cooperate at two distinct cis elements of mim-1, the promoter and a cell-type-specific enhancer, both of which are associated with DNase I hypersensitive sites in myelomonocytic cells but not in mim-1-nonexpressing cells. Previous work has shown that ectopic expression of Myb and C/EBPbeta activates the endogenous mim-1 gene in a nonhematopoietic cell type (fibroblasts), where the gene is normally completely silent. Here, we investigated the molecular details of this finding and show that the activation of mim-1 occurs by two independent mechanisms. In the absence of Myb, C/EBPbeta triggers the initial steps of chromatin opening at the mim-1 enhancer without inducing transcription of the gene. mim-1 transcription occurs only in the presence of Myb and is associated with chromatin opening at the promoter. Our work identifies a novel function for C/EBPbeta in the initial steps of a localized chromatin opening at a specific, physiologically relevant target region.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Acetyltransferases / biosynthesis
  • Acetyltransferases / genetics*
  • Animals
  • Base Sequence
  • Binding Sites / genetics
  • CCAAT-Enhancer-Binding Protein-beta / physiology*
  • Cell Line / metabolism
  • Chickens
  • Chromatin / genetics
  • Chromatin / ultrastructure*
  • Enhancer Elements, Genetic / genetics*
  • Fibroblasts / metabolism
  • Molecular Sequence Data
  • Multipotent Stem Cells / cytology
  • Multipotent Stem Cells / metabolism
  • Myeloid Cells / cytology*
  • Myelopoiesis / genetics*
  • Oncogene Proteins v-myb / physiology
  • Protein Structure, Tertiary
  • Proto-Oncogene Proteins c-myb / physiology*
  • Recombinant Fusion Proteins / physiology
  • Sequence Deletion
  • Transcriptional Activation

Substances

  • CCAAT-Enhancer-Binding Protein-beta
  • Chromatin
  • Oncogene Proteins v-myb
  • Proto-Oncogene Proteins c-myb
  • Recombinant Fusion Proteins
  • Acetyltransferases
  • mim-1 protein, Gallus gallus