Paenibacillus woosongensis sp. nov., a xylanolytic bacterium isolated from forest soil

Int J Syst Evol Microbiol. 2008 Mar;58(Pt 3):612-6. doi: 10.1099/ijs.0.65350-0.

Abstract

A novel xylan-degrading bacterium, YB-45(T), was isolated from forest soil. The organism is a facultatively anaerobic, Gram-variable, motile, endospore-forming, rod-shaped bacterium. It grew optimally at 37 degrees C and pH 7.5 in the presence of 3 % (w/v) NaCl. The predominant cellular fatty acids were anteiso-C(15 : 0), iso-C(15 : 0) and C(16 : 0). The DNA G+C content was 51.7 mol% and the predominant menaquinone was MK-7. Growth was observed with many carbohydrates, including xylan, as sole carbon sources. Strain YB-45(T) produces a wide variety of hydrolytic enzymes, such as xylanase, cellulase, amylase, beta-mannanase, beta-mannosidase, beta-xylosidase, alpha-galactosidase, beta-galactosidase and beta-glucosidase. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain YB-45(T) belongs to the genus Paenibacillus, sharing sequence similarity that was <96 %. It was related most closely to Paenibacillus jamilae DSM 13815(T), with 95.7 % sequence similarity. On the basis of morphological, chemotaxonomic, physiological and phylogenetic properties, strain YB-45(T) represents a novel species of the genus Paenibacillus, for which the name Paenibacillus woosongensis sp. nov. is proposed. The type strain is YB-45(T) (=KCTC 3953(T)=DSM 16971(T)).

MeSH terms

  • Bacteria / classification*
  • Bacteria / genetics
  • Bacteria / isolation & purification
  • Bacteria / metabolism
  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / analysis
  • DNA, Ribosomal / analysis
  • Fatty Acids / analysis
  • Genes, rRNA
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phenotype
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Species Specificity
  • Trees*
  • Xylans / metabolism*

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Xylans

Associated data

  • GENBANK/AY847463