Colicin N binds to the periphery of its receptor and translocator, outer membrane protein F

Structure. 2008 Mar;16(3):371-9. doi: 10.1016/j.str.2007.12.023.

Abstract

Colicins kill Escherichia coli after translocation across the outer membrane. Colicin N displays an unusually simple translocation pathway, using the outer membrane protein F (OmpF) as both receptor and translocator. Studies of this binary complex may therefore reveal a significant component of the translocation pathway. Here we show that, in 2D crystals, colicin is found outside the porin trimer, suggesting that translocation may occur at the protein-lipid interface. The major lipid of the outer leaflet interface is lipopolysaccharide (LPS). It is further shown that colicin N binding displaces OmpF-bound LPS. The N-terminal helix of the pore-forming domain, which is not required for pore formation, rearranges and binds to OmpF. Colicin N also binds artificial OmpF dimers, indicating that trimeric symmetry plays no part in the interaction. The data indicate that colicin is closely associated with the OmpF-lipid interface, providing evidence that this peripheral pathway may play a role in colicin transmembrane transport.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Binding, Competitive
  • Colicins / chemistry*
  • Colicins / metabolism*
  • Crystallization
  • Dimerization
  • Electrons
  • Escherichia coli Proteins / chemistry
  • Escherichia coli Proteins / metabolism
  • Lipopolysaccharides / chemistry
  • Lipopolysaccharides / metabolism
  • Membrane Lipids / chemistry
  • Membrane Lipids / metabolism
  • Models, Biological
  • Models, Molecular
  • Porins / chemistry*
  • Porins / metabolism*
  • Protein Binding
  • Protein Structure, Tertiary
  • Protein Transport
  • Receptors, Cell Surface / chemistry
  • Receptors, Cell Surface / metabolism

Substances

  • Colicins
  • Escherichia coli Proteins
  • Lipopolysaccharides
  • Membrane Lipids
  • OmpF protein
  • Porins
  • Receptors, Cell Surface
  • colicin receptor, E coli