Identification of auxins by a chemical genomics approach

J Exp Bot. 2008;59(10):2757-67. doi: 10.1093/jxb/ern133. Epub 2008 May 31.

Abstract

Thirteen auxenic compounds were discovered in a screen of 10 000 compounds for auxin-like activity in Arabidopsis roots. One of the most potent substances was 2-(4-chloro-2-methylphenoxy)-N-(4-H-1,2,4-triazol-3-yl)acetamide (WH7) which shares similar structure to the known auxenic herbicide 2,4-dichlorophenoxyacetic acid (2,4-D). A selected set of 20 analogues of WH7 was used to provide detailed information about the structure-activity relationship based on their efficacy at inhibiting and stimulating root and shoot growth, respectively, and at induction of gene expression. It was shown that WH7 acts in a genetically defined auxin pathway. These small molecules will extend the arsenal of substances that can be used to define auxin perception site(s) and to dissect subsequent signalling events.

Keywords: 2,4-D; Auxin; growth control; sensitivity; structure–activity.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Arabidopsis / drug effects
  • Arabidopsis / genetics
  • Arabidopsis / growth & development
  • Arabidopsis Proteins / antagonists & inhibitors
  • Arabidopsis Proteins / metabolism
  • Drug Resistance
  • Gene Expression Regulation, Plant / drug effects
  • Genomics*
  • Glycolates / pharmacology
  • Indoleacetic Acids / chemistry
  • Indoleacetic Acids / isolation & purification*
  • Indoleacetic Acids / pharmacology*
  • Membrane Transport Proteins / metabolism
  • Phenotype
  • Plant Growth Regulators / chemistry
  • Plant Growth Regulators / isolation & purification*
  • Plant Growth Regulators / pharmacology*
  • Plant Roots / drug effects
  • Plant Roots / genetics
  • Plant Roots / growth & development
  • Small Molecule Libraries
  • Structure-Activity Relationship

Substances

  • Arabidopsis Proteins
  • Glycolates
  • Indoleacetic Acids
  • Membrane Transport Proteins
  • PIN1 protein, Arabidopsis
  • Plant Growth Regulators
  • Small Molecule Libraries
  • 1-naphthoxyacetic acid