In vitro antibacterial effects of antilipopolysaccharide DNA aptamer-C1qrs complexes

Folia Microbiol (Praha). 2008;53(4):295-302. doi: 10.1007/s12223-008-0046-6. Epub 2008 Aug 31.

Abstract

DNA aptamers were developed against lipopolysaccharide (LPS) from E. coli O111:B4 and shown to bind both LPS and E. coli by a colorimetric enzyme-based microplate assay. The polyclonal aptamers were coupled to human C1qrs protein either directly using a bifunctional linker or indirectly using biotinylated aptamers and a streptavidin-C1qrs complex. Both systems significantly reduced colony counts when applied to E. coli O111:B4 and K12 strains across a series of 10x dilutions of the bacteria in the presence of human serum; it was diluted 1: 10(3) in order to avoid significant bacterial lysis by the competing alternate pathway of complement activation. A number of candidate DNA aptamer sequences were cloned and sequenced from the anti-LPS aptamer library for future screening of antibacterial or "antibiotic" potential and to aid in eventual development of an alternative therapy for antibiotic-resistant bacterial infections.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Anti-Bacterial Agents / chemistry
  • Anti-Bacterial Agents / immunology
  • Anti-Bacterial Agents / pharmacology*
  • Aptamers, Nucleotide / chemistry
  • Aptamers, Nucleotide / genetics
  • Aptamers, Nucleotide / immunology
  • Aptamers, Nucleotide / pharmacology*
  • Base Sequence
  • Complement C1 / chemistry
  • Complement C1 / immunology*
  • Escherichia coli / drug effects
  • Escherichia coli / immunology*
  • Escherichia coli Infections / drug therapy
  • Escherichia coli Infections / immunology
  • Humans
  • Lipopolysaccharides / chemistry
  • Lipopolysaccharides / immunology*
  • Molecular Sequence Data
  • SELEX Aptamer Technique

Substances

  • Anti-Bacterial Agents
  • Aptamers, Nucleotide
  • Complement C1
  • Lipopolysaccharides