Pseudoalteromonas arctica sp. nov., an aerobic, psychrotolerant, marine bacterium isolated from Spitzbergen

Int J Syst Evol Microbiol. 2008 Sep;58(Pt 9):2018-24. doi: 10.1099/ijs.0.64963-0.

Abstract

A novel aerobic, psychrotolerant marine bacterium was isolated at 4 degrees C from seawater samples collected from Spitzbergen in the Arctic. The strain was a polar-flagellated, Gram-negative bacterium that grew optimally at 10-15 degrees C and pH 7-8 in media containing 2-3% NaCl (w/v), using various carbohydrates and organic acids as substrates. The main fatty acid components included 16:0 (12.7% of total fatty acids), straight-chain saturated fatty acid methyl ester (FAME) and 16:1omega7c (40.2%) monounsaturated FAME. Phylogenetic analysis revealed a close relationship (99% 16S rRNA gene sequence similarity) between the novel isolate and Pseudoalteromonas elyakovii KMM 162T and some other species of the genus Pseudoalteromonas. The DNA G+C content of the novel strain was 39 mol%. DNA-DNA hybridization showed only 47.6% DNA-DNA relatedness with P. elyakovii KMM 162T, 44.2% with Pseudoalteromonas distincta KMM 638T and 22.6% with Pseudoalteromonas nigrifaciens NCIMB 8614T. Based on phylogenetic and phenotypic characteristics, this isolate represents a novel species of the genus Pseudoalteromonas for which the name Pseudoalteromonas arctica is proposed; the type strain is A 37-1-2T (=LMG 23753T=DSM 18437T).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anaerobiosis
  • Arctic Regions
  • Bacterial Typing Techniques
  • Base Composition
  • Carbohydrate Metabolism
  • Carboxylic Acids / metabolism
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Flagella
  • Genes, rRNA
  • Hydrogen-Ion Concentration
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phylogeny
  • Pseudoalteromonas / classification*
  • Pseudoalteromonas / genetics
  • Pseudoalteromonas / isolation & purification*
  • Pseudoalteromonas / physiology
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Sodium Chloride / metabolism
  • Temperature

Substances

  • Carboxylic Acids
  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Sodium Chloride

Associated data

  • GENBANK/DQ787199