Phenylobacterium composti sp. nov., isolated from cotton waste compost in Korea

Int J Syst Evol Microbiol. 2008 Oct;58(Pt 10):2301-4. doi: 10.1099/ijs.0.65530-0.

Abstract

A light-yellow-coloured bacterium, designated strain 4T-6(T), was isolated from cotton waste compost in Korea. Cells of the strain were strictly aerobic, Gram-negative, motile (by means of single polar flagella) and rod-shaped. Optimal growth occurred at 30 degrees C and at pH 7.0-8.0. The major fatty acids were 11-methyl C(18 : 1)omega7c (23.8 %), C(18 : 1)omega7c (23.2 %), C(16 : 0) (19.8 %) and C(17 : 0) (14.8 %). The DNA G+C content was 67.5 mol%. A phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 4T-6(T) was a member of the genus Phenylobacterium, showing the highest sequence similarities with those of 'Phenylobacterium zucineum' HLK1 (98.8 %) and Phenylobacterium lituiforme DSM 14363(T) (98.4 %). However, the values for DNA-DNA relatedness between strain 4T-6(T) and 'P. zucineum' HLK1 and P. lituiforme DSM 14363(T) were 45 and 43 %, respectively. Phylogenetic characteristics, physiological properties and DNA-DNA hybridization data indicate that strain 4T-6(T) represents a novel species of the genus Phenylobacterium, for which the name Phenylobacterium composti sp. nov. is proposed. The type strain is 4T-6(T) (=KACC 12597(T)=DSM 19425(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • Caulobacteraceae / chemistry
  • Caulobacteraceae / classification*
  • Caulobacteraceae / genetics*
  • Caulobacteraceae / isolation & purification
  • DNA, Bacterial / genetics
  • Fatty Acids / chemistry
  • Genes, Bacterial
  • Genes, rRNA
  • Gossypium / microbiology*
  • Korea
  • Molecular Sequence Data
  • Phenotype
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/EU022524