Initial crystallographic study of human PCNA in complex with a peptide containing the noncanonical PIP-box sequence of human DNA polymerase iota

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Oct 1;64(Pt 10):954-6. doi: 10.1107/S1744309108028522. Epub 2008 Sep 30.

Abstract

Human DNA polymerase iota (Poliota) is one of the Y-family DNA polymerases involved in translesion synthesis (TLS), which allows continued replication at damaged DNA templates. Poliota has a noncanonical PCNA-interacting protein box (PIP-box) within an internal region of the protein. Poliota activity is stimulated by PCNA binding through the noncanonical PIP-box. To clarify the interaction of PCNA with the noncanonical PIP-box of Poliota, PCNA and a Poliota peptide carrying the noncanonical PIP-box complex have been cocrystallized. The crystal belongs to space group C2, with unit-cell parameters a = 167.1, b = 68.7, c = 90.0 A, beta = 95.1 degrees . Structural analysis by molecular replacement is in progress.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Damage
  • DNA Polymerase iota
  • DNA Replication
  • DNA-Directed DNA Polymerase / chemistry*
  • DNA-Directed DNA Polymerase / metabolism*
  • Humans
  • Peptide Fragments / chemistry
  • Peptide Fragments / metabolism
  • Peptides / chemistry
  • Peptides / metabolism
  • Proliferating Cell Nuclear Antigen / chemistry*
  • Proliferating Cell Nuclear Antigen / metabolism*
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism
  • X-Ray Diffraction / methods

Substances

  • Peptide Fragments
  • Peptides
  • Proliferating Cell Nuclear Antigen
  • Recombinant Proteins
  • DNA-Directed DNA Polymerase
  • DNA Polymerase iota
  • POLI protein, human