Geobacter sulfurreducens contains separate C- and A-adding tRNA nucleotidyltransferases and a poly(A) polymerase

J Bacteriol. 2009 Jan;191(1):109-14. doi: 10.1128/JB.01166-08. Epub 2008 Oct 24.

Abstract

The genome of Geobacter sulfurreducens contains three genes whose sequences are quite similar to sequences encoding known members of an RNA nucleotidyltransferase superfamily that includes tRNA nucleotidyltransferases and poly(A) polymerases. Reverse transcription-PCR using G. sulfurreducens total RNA demonstrated that the genes encoding these three proteins are transcribed. These genes, encoding proteins designated NTSFI, NTSFII, and NTSFIII, were cloned and overexpressed in Escherichia coli. The corresponding enzymes were purified and assayed biochemically, resulting in identification of NTSFI as a poly(A) polymerase, NTSFII as a C-adding tRNA nucleotidyltransferase, and NTSFIII as an A-adding tRNA nucleotidyltransferase. Analysis of G. sulfurreducens rRNAs and mRNAs revealed the presence of heteropolymeric RNA 3' tails. This is the first characterization of a bacterial system that expresses separate C- and A-adding tRNA nucleotidyltransferases and a poly(A) polymerase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Base Sequence
  • Cloning, Molecular
  • DNA, Bacterial / genetics
  • DNA, Complementary / genetics
  • Genome, Bacterial*
  • Geobacter / classification
  • Geobacter / enzymology*
  • Geobacter / genetics
  • Molecular Sequence Data
  • Open Reading Frames
  • Phylogeny
  • Poly A / genetics
  • Polynucleotide Adenylyltransferase / genetics
  • Polynucleotide Adenylyltransferase / metabolism*
  • RNA Nucleotidyltransferases / genetics
  • RNA Nucleotidyltransferases / metabolism*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Alignment

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • DNA, Complementary
  • Poly A
  • RNA Nucleotidyltransferases
  • tRNA nucleotidyltransferase
  • Polynucleotide Adenylyltransferase