The intrinsically disordered cytoplasmic domain of the T cell receptor zeta chain binds to the nef protein of simian immunodeficiency virus without a disorder-to-order transition

Biochemistry. 2008 Dec 9;47(49):12942-4. doi: 10.1021/bi801602p.

Abstract

Intrinsically disordered proteins are thought to undergo coupled binding and folding upon interaction with their folded partners. In this study, we investigate whether binding of the intrinsically disordered T cell receptor zeta cytoplasmic tail to the well-folded simian immunodeficiency virus Nef core domain is accompanied by a disorder-to-order transition. We show that zeta forms a 1:1 complex with Nef and remains unfolded in the complex. Thus, our findings oppose the generally accepted view of the behavior of intrinsically disordered proteins and provide new evidence of the existence of specific interactions for unfolded protein molecules.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Cytoplasm / metabolism
  • Dimerization
  • Electrophoresis, Polyacrylamide Gel
  • Gene Products, nef / chemistry
  • Gene Products, nef / metabolism*
  • Protein Folding
  • Protein Structure, Tertiary
  • Receptors, Antigen, T-Cell / chemistry*
  • Receptors, Antigen, T-Cell / metabolism*
  • Simian Immunodeficiency Virus / chemistry*

Substances

  • Gene Products, nef
  • Receptors, Antigen, T-Cell
  • antigen T cell receptor, zeta chain

Associated data

  • PDB/1AVV