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, 25 (2), 288-9

AmiGO: Online Access to Ontology and Annotation Data

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AmiGO: Online Access to Ontology and Annotation Data

Seth Carbon et al. Bioinformatics.


AmiGO is a web application that allows users to query, browse and visualize ontologies and related gene product annotation (association) data. AmiGO can be used online at the Gene Ontology (GO) website to access the data provided by the GO Consortium; it can also be downloaded and installed to browse local ontologies and annotations. AmiGO is free open source software developed and maintained by the GO Consortium.

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    1. Altschul SF, et al. Basic local alignment search tool. J. Mol. Biol. 1990;215:403–410. - PubMed
    1. Boyle EI, et al. GO::TermFinder—open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes. Bioinformatics. 2004;20:3710–3715. - PMC - PubMed
    1. Gene Ontology Consortium. Gene Ontology: tool for the unification of biology. Nature Genet. 2000;25:25–29. - PMC - PubMed

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