Blot-sequencing of antibodies: application to analysis of V gene usage among anti-steroid monoclonal antibodies

Immunology. 1991 Apr;72(4):471-80.

Abstract

Automated gas-phase protein sequencing has been used to characterize variable regions of antibody heavy and light chains separated by SDS-polyacrylamide gel electrophoresis (PAGE) and electroblotted onto Immobilon polyvinylidene difluoride membranes ('blot-sequencing'). Starting from 100 micrograms of antibody, 20 or more residues of N-terminal VH and VL sequences can regularly be obtained, which is often sufficient to assign the V region to a known family or subgroup. We have applied the blot-sequencing method to analysis of VH and VL usage among a panel of monoclonal anti-steroid antibodies, namely anti-progesterone, anti-pregnanediol, anti-estrone and anti-testosterone. The results demonstrate restricted, repetitive usage of VL subgroups and VH families related to anti-steroid specificities. VL regions of the VK1 group were particularly associated with anti-progesterone, VK21 with anti-estrone, and VK8 and VK9 with anti-pregnanediol. VH regions of anti-progesterone antibodies were all derived from the VHVGAM3.8 family; anti-estrone and anti-pregnanediol antibodies were derived from the VH7183 and VH36-60 families. The latter two families appear to characterize antibodies raised against steroids conjugated to proteins via a sugar bridge. Differences in VH/VL combination were associated with diversity of antibody specificity. In order to extend the sequence data obtained by this technique and confirm family assignments, we have shown that internal V-region sequences can be obtained by limited chemical cleavage of whole antibody with cyanogen bromide, followed by separation of individual fragments by SDS-PAGE and blot-sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antibodies, Monoclonal / genetics*
  • Antibody Specificity
  • Cyanogen Bromide
  • Electrophoresis, Polyacrylamide Gel
  • Genes, Immunoglobulin / immunology*
  • Gonadal Steroid Hormones / immunology*
  • Immunoblotting
  • Immunoglobulin Heavy Chains / chemistry
  • Immunoglobulin Light Chains / chemistry
  • Molecular Sequence Data
  • Pregnanediol / analogs & derivatives*
  • Pregnanediol / immunology

Substances

  • Antibodies, Monoclonal
  • Gonadal Steroid Hormones
  • Immunoglobulin Heavy Chains
  • Immunoglobulin Light Chains
  • pregnanediol-3 alpha-glucuronide
  • Pregnanediol
  • Cyanogen Bromide