Molecular characterization of five human anti-human immunodeficiency virus type 1 antibody heavy chains reveals extensive somatic mutation typical of an antigen-driven immune response

Proc Natl Acad Sci U S A. 1991 Sep 1;88(17):7783-7. doi: 10.1073/pnas.88.17.7783.

Abstract

We report the heavy chain variable region sequences from the cDNAs of five previously described monoclonal cell lines producing human antibodies specific for the human immunodeficiency virus type 1 and detail the molecular characteristics, germ-line origins, and extent of somatic mutation among these antibodies. Three of the five heavy chain variable regions derive from the VHIV gene family, but each has arisen from a different heavy chain variable region (VH) gene segment within the VHIV family. In addition, one is derived from a VHI gene segment, and one is derived from a VHV gene segment. Since four of the five antibodies arise from known germ-line VH elements, a precise determination of the extent of somatic variation is possible. The amount of variation from the closest germ-line sequence ranges from 4.5% to 14.8% among these antibodies, most of which is concentrated in the complementarity-determining regions. In general, the diversity (D) segments are long, characteristic of D-D fusions and/or extensive terminal deoxynucleotidyltransferase activity; however, definitive homologies cannot be found with the known germ-line D segments. Joining (JH) gene segment utilization appears random. The use of five different germ-line VH gene segments and extensive somatic mutation provides evidence that a polyclonal, antigen-driven immune response occurs during the natural infection with human immunodeficiency virus.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Antibodies, Monoclonal / genetics*
  • Antibody Formation / genetics*
  • Base Sequence
  • Cell Line
  • Cloning, Molecular
  • Genes, Immunoglobulin*
  • HIV Antibodies / genetics*
  • HIV-1 / immunology*
  • Humans
  • Immunoglobulin Heavy Chains / genetics*
  • Immunoglobulin Variable Region / genetics*
  • Molecular Sequence Data
  • Multigene Family*
  • Mutation*
  • Oligonucleotide Probes
  • Polymerase Chain Reaction / methods

Substances

  • Antibodies, Monoclonal
  • HIV Antibodies
  • Immunoglobulin Heavy Chains
  • Immunoglobulin Variable Region
  • Oligonucleotide Probes

Associated data

  • GENBANK/M67500
  • GENBANK/M67501
  • GENBANK/M67502
  • GENBANK/M67503
  • GENBANK/M67504
  • GENBANK/M94197
  • GENBANK/M94198
  • GENBANK/M94199
  • GENBANK/M94200
  • GENBANK/X53420