Gene cloning and biochemical characterization of an alcohol dehydrogenase from Euglena gracilis

J Eukaryot Microbiol. 2008 Nov-Dec;55(6):554-61. doi: 10.1111/j.1550-7408.2008.00359.x.

Abstract

Euglena gracilis is a freshwater free-living organism able to grow with ethanol as carbon source; to facilitate this metabolism several alcohol dehydrogenase (ADH) activities have been detected. We report the gene cloning, over-expression, and biochemical characterization of a medium-chain NAD(+)-dependent ADH from E. gracilis (EgADH). The enzyme's amino acid sequence displayed the highest percentages of similarity and identity with ADHs of bacteria and fungi. In the predicted three-dimensional model, all the residues involved in Zn(2+), cofactor, and substrate binding were conserved. A conventional signal peptide for import into mitochondria could not be clearly identified. The protein of 37 kDa was over-expressed, purified to homogeneity, and kinetically characterized. The enzyme's optimal pH was 7.0 for ethanol oxidation displaying a V(m) of 11.7+/-3.6 U/mg protein and a K(m) of 3.2+/-0.7 mM for this substrate. Isopropanol and isopentanol were also utilized, although with less efficiency. It showed specificity for NAD(+) with a K(m) value of 0.39+/-0.1 mM and Mg(2+) or Zn(2+) were essential for activity. The recombinant EgADH reported here may help to elucidate the roles that different ADHs have on the metabolism of short- and long-chain alcohols in this microorganism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alcohol Dehydrogenase / chemistry*
  • Alcohol Dehydrogenase / genetics*
  • Alcohol Dehydrogenase / metabolism
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cloning, Molecular*
  • Enzyme Stability
  • Euglena gracilis / chemistry
  • Euglena gracilis / enzymology*
  • Euglena gracilis / genetics
  • Kinetics
  • Molecular Sequence Data
  • Molecular Structure
  • Protozoan Proteins / chemistry*
  • Protozoan Proteins / genetics*
  • Protozoan Proteins / metabolism
  • Sequence Alignment
  • Substrate Specificity

Substances

  • Protozoan Proteins
  • Alcohol Dehydrogenase