Structure and promoter characterization of aldo-keto reductase family 1 B10 gene

Gene. 2009 May 15;437(1-2):39-44. doi: 10.1016/j.gene.2009.02.007. Epub 2009 Feb 21.

Abstract

Aldo-keto reductase family 1 member B10 (AKR1B10) is overexpressed in human hepatocellular carcinoma, lung squamous carcinoma, and lung adenocarcinoma in smokers. Our recent studies have showed that AKR1B10 plays a critical role in the growth and proliferation of cancer cells by detoxifying reactive carbonyls and regulating fatty acid biosynthesis. However, little is known about the regulatory mechanisms of AKR1B10 expression. In this study, we determined the structure of AKR1B10 gene and characterized its promoter. The results demonstrated that AKR1B10 consists of 10 exons and 9 introns, stretching approximately 13.8 kb. A 5'-RACE study determined the transcriptional start site of AKR1B10 at 320 bp upstream of the ATG translational start codon. A TATA-like (TAATAA) and a CAAT box are present from -145 to -140 bp and -193 to -190 bp upstream of the transcriptional start site, respectively. Motif analysis recognized multiple putative oncogenic and tumor suppressor protein binding sites in the AKR1B10 promoter, including c-Ets-1, C/EBP, AP-1, and p53, but osmolytic response elements were not found. A -4091 bp of the 5'-flanking fragment of the AKR1B10 gene was capable of driving GFP and luciferase reporter gene expression in HepG2 cells derived from human hepatocellular carcinoma; progressive 5'-deletions revealed that a -255 bp fragment possesses full promoter activity.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aldehyde Reductase / chemistry*
  • Aldehyde Reductase / genetics*
  • Aldo-Keto Reductases
  • Base Sequence
  • Gene Deletion
  • Gene Expression Regulation, Neoplastic
  • Humans
  • Molecular Sequence Data
  • Neoplasms / metabolism
  • Promoter Regions, Genetic*

Substances

  • AKR1B10 protein, human
  • Aldo-Keto Reductases
  • Aldehyde Reductase