Characterization of a new HLA-C allele in a Chinese family by sequence-based typing: HLA-Cw*0348

Tissue Antigens. 2009 Jun;73(6):616-8. doi: 10.1111/j.1399-0039.2009.01250.x. Epub 2009 Apr 6.

Abstract

The novel human leukocyte antigen (HLA)-Cw*0348 allele was identified by sequence-based typing in a Chinese family. This allele shows that the sequences of exons 1-3 of HLA-Cw*0348 are identical to those of HLA-Cw*030401 except for a nucleotide substitution that changes CCG to CTG at codon 57, resulting in an amino acid change from Pro to Leu in the protein, and this is a unique nucleotide change among the HLA-C alleles, suggesting a point mutation mechanism. The extended haplotype carrying the new allele was deduced from the family group typing and defined as A*110101, B*1301, Cw*0348, DRB1*0405, and DQB1*0402.

MeSH terms

  • Adult
  • Alleles
  • Amino Acid Substitution / genetics*
  • Asian People / genetics*
  • Base Sequence
  • Exons / genetics
  • HLA-C Antigens / genetics*
  • Humans
  • Male
  • Molecular Sequence Data
  • Pedigree
  • Sequence Alignment
  • Sequence Analysis, DNA

Substances

  • HLA-C Antigens