One plasmid selection system for the rapid evolution of aminoacyl-tRNA synthetases

Bioorg Med Chem Lett. 2009 Jul 15;19(14):3845-7. doi: 10.1016/j.bmcl.2009.04.007. Epub 2009 Apr 9.

Abstract

We have developed a rapid, straightforward, one plasmid dual positive/negative selection system for the evolution of aminoacyl-tRNA synthetases with altered specificities in Escherichia coli. This system utilizes an amber stop codon containing chloramphenicol acetyltransferase/uracil phosphoribosyltransferase fusion gene. We demonstrate the utility of the system by identifying a variant of the Methanococcus jannaschii tyrosyl synthetase from a library of 10(9) variants that selectively incorporates para-iodophenylalanine in response to an amber stop codon.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acyl-tRNA Synthetases / genetics*
  • Chloramphenicol O-Acetyltransferase / genetics
  • Chloramphenicol O-Acetyltransferase / metabolism
  • Codon, Terminator / genetics
  • Codon, Terminator / metabolism
  • Directed Molecular Evolution*
  • Escherichia coli / enzymology
  • Methanococcus / enzymology
  • Pentosyltransferases / genetics
  • Pentosyltransferases / metabolism
  • Phenylalanine / analogs & derivatives
  • Phenylalanine / chemistry
  • Phenylalanine / metabolism
  • Plasmids*
  • Tyrosine-tRNA Ligase / genetics
  • Tyrosine-tRNA Ligase / metabolism

Substances

  • Codon, Terminator
  • Phenylalanine
  • Chloramphenicol O-Acetyltransferase
  • Pentosyltransferases
  • uracil phosphoribosyltransferase
  • Amino Acyl-tRNA Synthetases
  • Tyrosine-tRNA Ligase
  • 4-iodophenylalanine