Bifidobacterium bombi sp. nov., from the bumblebee digestive tract

Int J Syst Evol Microbiol. 2009 Aug;59(Pt 8):2020-4. doi: 10.1099/ijs.0.002915-0. Epub 2009 Jun 30.

Abstract

Gram-positive-staining, anaerobic, non-spore-forming, lactate- and acetate-producing bacterial strains were isolated from the digestive tracts of different bumblebee species (Bombus lucorum, Bombus pascuorum and Bombus lapidarius). All of the isolates produced fructose-6-phosphate phosphoketolase activity. A representative strain, BluCI/TPT, was characterized further. Cells of strain BluCI/TPT showed occasional bifurcation and irregular constrictions. The bacterium utilized a wide range of carbohydrates. Glucose was fermented to acetate and lactate. The DNA base composition was 47.2 mol% G+C. Complete 16S rRNA and partial hsp60 gene sequences were obtained and phylogenetic relationships were determined. Strain BluCI/TPT and related isolates were located in the actinobacterial cluster and were closely related to the genera Bifidobacterium, Scardovia, Aeriscardovia and Parascardovia. The results presented support the proposal of a novel species to accommodate strain BluCI/TPT, with the name Bifidobacterium bombi sp. nov.; the type strain is BluCI/TPT (=DSM 19703T=ATCC BAA-1567T).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetates / metabolism
  • Aldehyde-Lyases / metabolism
  • Anaerobiosis
  • Animals
  • Bacterial Typing Techniques
  • Base Composition
  • Bees / microbiology*
  • Bifidobacterium / classification*
  • Bifidobacterium / genetics
  • Bifidobacterium / isolation & purification*
  • Bifidobacterium / physiology
  • Carbohydrate Metabolism
  • Cluster Analysis
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Gastrointestinal Tract / microbiology*
  • Lactic Acid / metabolism
  • Microscopy, Electron, Scanning
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Spores, Bacterial / cytology

Substances

  • Acetates
  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S
  • Lactic Acid
  • Aldehyde-Lyases
  • fructose-6-phosphate phosphoketolase

Associated data

  • GENBANK/EU127549
  • GENBANK/EU869281