Structural and synthetic investigations of tanikolide dimer, a SIRT2 selective inhibitor, and tanikolide seco-acid from the Madagascar marine cyanobacterium Lyngbya majuscula

J Org Chem. 2009 Aug 7;74(15):5267-75. doi: 10.1021/jo900578j.

Abstract

Tanikolide seco-acid 2 and tanikolide dimer 3, the latter a novel and selective SIRT2 inhibitor, were isolated from the Madagascar marine cyanobacterium Lyngbya majuscula. The structure of 2, isolated as the pure R enantiomer, was elucidated by X-ray experiment in conjunction with NMR and optical rotation data, whereas the depside molecular structure of 3 was initially thought to be a meso compound as established by NMR, MS, and chiral HPLC analyses. Subsequent total synthesis of the three tanikolide dimer stereoisomers 4, 5, and ent-5, followed by chiral GC-MS comparisons with the natural product, showed it to be exclusively the R,R-isomer 5. Tanikolide dimer 3 (= 5) inhibited SIRT2 with an IC(50) = 176 nM in one assay format and 2.4 microM in another. Stereochemical determination of symmetrical dimers such as compound 3 pose intriguing and subtle questions in structure elucidation and, as shown in the current work, are perhaps best answered in conjunction with total synthesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cyanobacteria / chemistry*
  • Dimerization
  • Enzyme Inhibitors / chemistry*
  • Enzyme Inhibitors / isolation & purification
  • Enzyme Inhibitors / pharmacology
  • Humans
  • Lactones / chemistry*
  • Lactones / isolation & purification
  • Lactones / pharmacology
  • Madagascar
  • Molecular Conformation
  • Molecular Structure
  • Sirtuin 2 / antagonists & inhibitors
  • Stereoisomerism

Substances

  • Enzyme Inhibitors
  • Lactones
  • tanikolide
  • SIRT2 protein, human
  • Sirtuin 2