Proposal to elevate Mycobacterium avium complex ITS sequevar MAC-Q to Mycobacterium vulneris sp. nov

Int J Syst Evol Microbiol. 2009 Sep;59(Pt 9):2277-82. doi: 10.1099/ijs.0.008854-0. Epub 2009 Jul 20.

Abstract

The Mycobacterium avium complex (MAC) consists of four recognized species, Mycobacterium avium, Mycobacterium colombiense, Mycobacterium intracellulare and Mycobacterium chimaera, and a variety of other strains that may be members of undescribed taxa. We report on two isolates of a scotochromogenic, slowly growing, non-tuberculous Mycobacterium species within the M. avium complex from a lymph node and an infected wound after a dogbite of separate patients in The Netherlands. The extrapulmonary infections in immunocompetent patients suggested a high level of virulence. These isolates were characterized by a unique nucleotide sequence in the 16S rRNA gene, 99% similar to Mycobacterium colombiense, and the MAC-Q 16S-23S internal transcribed spacer (ITS) sequence. Sequence analyses of the hsp65 gene revealed 97% similarity to M. avium. The rpoB gene sequence was 98% similar to M. colombiense. Phenotypically, the scotochromogenicity, positive semi-quantitative catalase and heat-stable catalase tests, negative tellurite reductase and urease tests and susceptibility to hydroxylamine and oleic acid set these isolates apart from related species. High-performance liquid chromatography analysis of cell-wall mycolic acid content revealed a unique pattern, related to that of M. avium and M. colombiense. Together, these findings supported a separate species status within the Mycobacterium avium complex. We propose elevation of scotochromogenic M. avium complex strains sharing this 16S gene and MAC-Q ITS sequence to separate species status, for which the name Mycobacterium vulneris sp. nov. is proposed. The type strain is NLA000700772T (=DSM 45247T=CIP 109859T).

MeSH terms

  • Antitubercular Agents / pharmacology
  • Bacterial Proteins / genetics
  • Bacterial Typing Techniques
  • Catalase / metabolism
  • Cell Wall / chemistry
  • Cluster Analysis
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • DNA, Ribosomal Spacer / chemistry
  • DNA, Ribosomal Spacer / genetics
  • DNA-Directed RNA Polymerases / genetics
  • Humans
  • Hydroxylamine / pharmacology
  • Lymph Nodes / microbiology*
  • Molecular Sequence Data
  • Mycobacterium Infections / microbiology*
  • Mycobacterium avium Complex / classification*
  • Mycobacterium avium Complex / genetics*
  • Mycobacterium avium Complex / isolation & purification
  • Mycobacterium avium Complex / physiology
  • Mycolic Acids / analysis
  • Oleic Acid / pharmacology
  • Oxidoreductases / metabolism
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Urease / metabolism

Substances

  • Antitubercular Agents
  • Bacterial Proteins
  • DNA, Bacterial
  • DNA, Ribosomal
  • DNA, Ribosomal Spacer
  • Mycolic Acids
  • RNA, Ribosomal, 16S
  • Hydroxylamine
  • Oleic Acid
  • Oxidoreductases
  • Catalase
  • tellurite reductase
  • DNA-Directed RNA Polymerases
  • RNA polymerase beta subunit
  • Urease

Associated data

  • GENBANK/EU834054
  • GENBANK/EU834055
  • GENBANK/EU834056
  • GENBANK/EU834057