Chelatococcus sambhunathii sp. nov., a moderately thermophilic alphaproteobacterium isolated from hot spring sediment

Int J Syst Evol Microbiol. 2010 Apr;60(Pt 4):861-865. doi: 10.1099/ijs.0.013466-0. Epub 2009 Aug 6.

Abstract

A moderately thermophilic bacterial strain (HT4(T)) isolated from a hot spring sediment was characterized phenotypically and phylogenetically. Cells were Gram-negative, aerobic, non-sporulating, rod-shaped and motile by means of a single polar flagellum. Both oxidase and catalase activities were positive. Heterotrophic growth was observed at pH 6.0-8.5 and at 20-50 degrees C; optimum growth occurred at pH 7.5-8.0 and 37-42 degrees C. The major cellular fatty acids were C( 14 : 0) 3-OH, C(18 : 0) 3-OH, C( 18 : 1) 2-OH, C(18 : 1)omega 7c and C(19 : 0) cyclo omega8 c. The DNA G+C content of strain HT4(T) was 67.8 mol%. 16S rRNA gene sequence analysis indicated that strain HT4(T) clustered within the radiation of the genus Chelatococcus and showed 99.0 % similarity with Chelatococcus daeguensis CCUG 54519(T) and 96 % similarity with Chelatococcus asaccharovorans DSM 6462(T). However, levels of DNA-DNA relatedness between strain HT4(T) and Chelatococcus daeguensis CCUG 54519(T) and Chelatococcus asaccharovorans DSM 6462(T) were 52 and 20%, respectively. On the basis of the phenotypic, physiological and chemotaxonomic data, 16S rRNA gene sequence analysis and DNA-DNA hybridization results, strain HT4(T) is considered to represent a novel species of the genus Chelatococcus, for which the name Chelatococcus sambhunathii sp. nov. is proposed. The type strain is HT4(T) (=DSM 18167(T)=JCM 14988(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Beijerinckiaceae / classification*
  • Beijerinckiaceae / genetics
  • Beijerinckiaceae / isolation & purification*
  • Beijerinckiaceae / physiology
  • DNA, Ribosomal / analysis
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Genes, rRNA
  • Genotype
  • Geologic Sediments / microbiology*
  • Hot Springs / microbiology*
  • Hot Temperature
  • India
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phenotype
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Species Specificity

Substances

  • DNA, Ribosomal
  • Fatty Acids
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/DQ322070