Fast and accurate predictions of protein NMR chemical shifts from interatomic distances

J Am Chem Soc. 2009 Oct 7;131(39):13894-5. doi: 10.1021/ja903772t.

Abstract

We present a method, CamShift, for the rapid and accurate prediction of NMR chemical shifts from protein structures. The calculations performed by CamShift are based on an approximate expression of the chemical shifts in terms of polynomial functions of interatomic distances. Since these functions are very fast to compute and readily differentiable, the CamShift approach can be utilized in standard protein structure calculation protocols.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Computer Simulation
  • Models, Chemical
  • Nuclear Magnetic Resonance, Biomolecular / methods*
  • Protein Conformation*
  • Protein Structure, Tertiary
  • Proteins / chemistry*

Substances

  • Proteins