Functional near infrared spectroscopy (NIRS) signal improvement based on negative correlation between oxygenated and deoxygenated hemoglobin dynamics

Neuroimage. 2010 Feb 15;49(4):3039-46. doi: 10.1016/j.neuroimage.2009.11.050. Epub 2009 Nov 26.


Near infrared spectroscopy (NIRS) is a promising technology for functional brain imaging which measures hemodynamic signals from the cortex, similar to functional magnetic resonance imaging (fMRI), but does not require the participant to lie motionless in a confined space. NIRS can therefore be used for more naturalistic experiments, including face to face communication, or natural body movements, and is well suited for real-time applications that may require lengthy training. However, improving signal quality and reducing noise, especially noise induced by head motion, is challenging, particularly for real time applications. Here we study the properties of head motion induced noise, and find that motion noise causes the measured oxygenated and deoxygenated hemoglobin signals, which are typically strongly negatively correlated, to become more positively correlated. Next, we develop a method to reduce noise based on the principle that the concentration changes of oxygenated and deoxygenated hemoglobin should be negatively correlated. We show that despite its simplicity, this method is effective in reducing noise and improving signal quality, for both online and offline noise reduction.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Algorithms*
  • Brain Mapping / methods*
  • Cerebral Cortex / physiology*
  • Evoked Potentials / physiology*
  • Female
  • Hemoglobins / metabolism*
  • Humans
  • Male
  • Oxygen / metabolism*
  • Reproducibility of Results
  • Sensitivity and Specificity
  • Spectroscopy, Near-Infrared / methods*
  • Statistics as Topic
  • Young Adult


  • Hemoglobins
  • deoxyhemoglobin
  • Oxygen