jTraqX: a free, platform independent tool for isobaric tag quantitation at the protein level

Proteomics. 2010 Mar;10(6):1223-5. doi: 10.1002/pmic.200900374.


Many proteomic studies focus on quantitative aspects, using different stable isotope labeling techniques that require specialized software to analyze the generated data. Here we present jTraqX, an easy-to-use tool for processing and visualizing protein quantification data. jTraqX is platform independent and is compatible with all available 4-plex isobaric tags. jTraqX can be freely downloaded at http://sourceforge.net/projects/protms.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Isotope Labeling / methods*
  • Proteins / analysis*
  • Proteomics / methods*
  • Software*


  • Proteins