Biosynthesis of the putative siderophore erythrochelin requires unprecedented crosstalk between separate nonribosomal peptide gene clusters

Chem Biol. 2010 Feb 26;17(2):160-73. doi: 10.1016/j.chembiol.2010.01.011.

Abstract

The genome of the erythromycin-producing bacterium Saccharopolyspora erythraea contains many orphan secondary metabolite gene clusters including two (nrps3 and nrps5) predicted to govern biosynthesis of nonribosomal peptide-based siderophores. We report here the production by S. erythraea, even under iron-sufficient conditions, of a 2,5-diketopiperazine siderophore candidate we have named erythrochelin. Deletion of the nonribosomal peptide synthetase (NRPS) gene ercD within the nrps5 cluster abolished erythrochelin production. The tetrapeptide backbone of erythrochelin (alpha-N-acetyl-delta-N-acetyl-delta-N-hydroxyornithine-serine-delta-N-hydroxyornithine-delta-N-acetyl-delta-N-hydroxyornithine) suggests an orthodox colinear model for erythrochelin assembly. Curiously, the delta-N-acetyltransferase required for erythrochelin biosynthesis is encoded within a remote NRPS-cluster (nrps1) whose own NRPS contains an inactivating mutation. Disruption of the nrps1 gene mcd abolished erythrochelin biosynthesis, which could then be restored by addition of synthetic L-delta-N-acetyl-delta-N-hydroxyornithine, confirming an unprecedented example of functional crosstalk between nrps clusters.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Anti-Bacterial Agents / biosynthesis*
  • Anti-Bacterial Agents / chemistry
  • Anti-Bacterial Agents / pharmacology
  • Computational Biology
  • Diketopiperazines / chemistry
  • Diketopiperazines / pharmacology
  • Genes, Bacterial
  • Molecular Sequence Data
  • Multigene Family
  • Oligopeptides / biosynthesis*
  • Oligopeptides / chemistry
  • Oligopeptides / pharmacology
  • Peptide Biosynthesis, Nucleic Acid-Independent / genetics*
  • Peptide Synthases / deficiency
  • Peptide Synthases / genetics
  • Peptide Synthases / metabolism*
  • Siderophores / biosynthesis*
  • Siderophores / chemistry
  • Siderophores / pharmacology

Substances

  • Anti-Bacterial Agents
  • Diketopiperazines
  • Oligopeptides
  • Siderophores
  • erythrochelin
  • Peptide Synthases
  • non-ribosomal peptide synthase