Microbacterium mitrae sp. nov., isolated from salted turban shell

Int J Syst Evol Microbiol. 2011 Feb;61(Pt 2):399-403. doi: 10.1099/ijs.0.021519-0. Epub 2010 Mar 19.

Abstract

A novel bacterium (strain M4-8(T)) belonging to the genus Microbacterium was isolated from salted turban shell, which is a traditional fermented food in Korea. Its morphology, physiology, biochemical features and 16S rRNA gene sequence were characterized. Cells of this strain were Gram-positive, non-motile, non-spore-forming rods that formed yellow-pigmented colonies. It grew in 0-8 % (w/v) NaCl and at 15-37 °C, with optimal growth occurring in 1 % (w/v) NaCl and at 30 °C. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain M4-8(T) is associated with members of the genus Microbacterium. Within the phylogenetic tree, this novel strain shared a branching point with Microbacterium hominis IFO 15708(T) (97.8 % similarity). The DNA G+C content was 71.3 mol% and DNA-DNA hybridization experiments showed a low level (<29 %) of DNA-DNA relatedness between M4-8(T) and its closest relatives. The major fatty acids were iso-C(15 : 0) and anteiso-C(15 : 0) and the major cell-wall diamino acid was ornithine. Data obtained from DNA-DNA hybridization and chemotaxonomic phenotypic analysis support the conclusion that strain M4-8(T) represents a novel species within the genus Microbacterium. The name Microbacterium mitrae sp. nov. is proposed, with M4-8(T) (=KACC 21129(T) =JCM 16363(T)) as the type strain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinomycetales / classification*
  • Actinomycetales / genetics
  • Actinomycetales / isolation & purification
  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / genetics
  • Fatty Acids / analysis
  • Fermentation
  • Food Microbiology*
  • Molecular Sequence Data
  • Ornithine / analysis
  • Phylogeny*
  • Pigments, Biological / analysis
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Sequence Analysis, DNA
  • Sodium Chloride

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Pigments, Biological
  • RNA, Ribosomal, 16S
  • Sodium Chloride
  • Ornithine

Associated data

  • GENBANK/GQ351351