[Analysis of full-length gene sequence of a rabies vaccine strain CTN-1 for human use in China]

Bing Du Xue Bao. 2010 May;26(3):195-201.
[Article in Chinese]

Abstract

CTN-1 is one of the rabies vaccine strains for human use in China, but there has been no report on the full-length gene sequence of CTN-1. In this study, the full-length gene of CTN-1 was amplified by RT-PCR, each PCR product was cloned into T vector and then sequenced, assemblied and compared with other vaccine strains as well as the wild Chinese rabies isolates. The phylogenetic tree of G gene was constructed and the genetic homology was analyzed. The results revealed that CTN-1 was 11 925nt (GenBank accession number: FJ959397)in length and belonged to the genotype I. The full-length nucleotide homologies among CTN-1 and other rabies virus strains were between 81.5%-93.4%, of which the lowest 81.5% was between CTN-1 strain and bat isolate SHBRV, and the highest 93.4% was between CTN-1 and Chinese isolate HN10. The phylogenetic analysis revealed that the majority of Chinese isolates could be grouped into the same clade with the CTN-1 strain, but aG and some vaccine strains from abroad such as Flury, PM, PV, ERA, RC-HL and a few Chinese strains were grouped in another clade. Comparsion of the G protein genes also showed that the homologies among CTN-1 and most of the Chinese isolates were higher than that of the other vaccine strains to those Chinese strains. Therefore, it suggests that the CTN-1 strain is more suitable and rational to be used for the production of rabies inactivated vaccine in China than the others.

Publication types

  • English Abstract

MeSH terms

  • Genome, Viral / genetics*
  • Humans
  • Molecular Sequence Data
  • Phylogeny
  • Rabies / prevention & control
  • Rabies / virology
  • Rabies virus / classification
  • Rabies virus / genetics*
  • Rabies virus / immunology
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Viral Vaccines / genetics*

Substances

  • Viral Vaccines

Associated data

  • GENBANK/FJ959397