Type I and type II genes for the chlorophyll a/b-binding protein in the gymnosperm Pinus sylvestris (Scots pine): cDNA cloning and sequence analysis

Plant Mol Biol. 1990 Mar;14(3):287-96. doi: 10.1007/BF00028766.

Abstract

A cDNA library was constructed from mRNA prepared from light-treated seedlings of Scots pine (Pinus sylvestris L.) and cDNAs for the chlorophyll a/b-binding protein LHC-II were identified using a pea gene as the heterologous probe. Three cDNA clones were sequenced. The deduced amino acid sequences of two of the genes corresponded to Type I and one to Type II LHC-II proteins which were ca. 90% homologous to their angiosperm counterparts. The transit peptides of the Scots pine preLHC-II showed features common to angiosperm transit peptides. The three cDNAs had a 70 to 75% preference for G + C in the third base position. CpG and GpC profiles and degenerate codon position bias suggested that two of the corresponding genes lie within CpG islands.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Carrier Proteins / genetics
  • Carrier Proteins / metabolism
  • Chlorophyll / metabolism
  • Chlorophyll A
  • Codon / genetics
  • DNA / genetics*
  • Light-Harvesting Protein Complexes*
  • Molecular Sequence Data
  • Photosynthetic Reaction Center Complex Proteins / genetics*
  • Photosynthetic Reaction Center Complex Proteins / metabolism
  • Pinus sylvestris
  • Plants / genetics*
  • Plants / metabolism
  • Species Specificity

Substances

  • Carrier Proteins
  • Codon
  • Light-Harvesting Protein Complexes
  • Photosynthetic Reaction Center Complex Proteins
  • Chlorophyll
  • chlorophyll b
  • DNA
  • Chlorophyll A

Associated data

  • GENBANK/X14505
  • GENBANK/X14506
  • GENBANK/X14507