Construction of a genetic AND gate under a new standard for assembly of genetic parts

BMC Genomics. 2010 Dec 2;11 Suppl 4(Suppl 4):S16. doi: 10.1186/1471-2164-11-S4-S16.

Abstract

Background: Appropriate regulation of respective gene expressions is a bottleneck for the realization of artificial biological systems inside living cells. The modification of several promoter sequences is required to achieve appropriate regulation of the systems. However, a time-consuming process is required for the insertion of an operator, a binding site of a protein for gene expression, to the gene regulatory region of a plasmid. Thus, a standardized method for integrating operator sequences to the regulatory region of a plasmid is required.

Results: We developed a standardized method for integrating operator sequences to the regulatory region of a plasmid and constructed a synthetic promoter that functions as a genetic AND gate. By standardizing the regulatory region of a plasmid and the operator parts, we established a platform for modular assembly of the operator parts. Moreover, by assembling two different operator parts on the regulatory region, we constructed a regulatory device with an AND gate function.

Conclusions: We implemented a new standard to assemble operator parts for construction of functional genetic logic gates. The logic gates at the molecular scale have important implications for reprogramming cellular behavior.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Binding Sites / genetics
  • Computational Biology / methods*
  • Escherichia coli / genetics
  • Gene Expression
  • Gene Expression Regulation, Bacterial
  • Genes, Bacterial
  • Genes, Reporter
  • Green Fluorescent Proteins / metabolism
  • Operator Regions, Genetic / genetics
  • Plasmids / genetics*
  • Plasmids / standards*
  • Regulatory Sequences, Nucleic Acid / genetics*

Substances

  • Green Fluorescent Proteins