Ribosome display selection of a murine IgG₁ Fab binding affibody molecule allowing species selective recovery of monoclonal antibodies

Mol Biotechnol. 2011 Jul;48(3):263-76. doi: 10.1007/s12033-010-9367-1.

Abstract

Affinity reagents recognizing constant parts of antibody molecules are invaluable tools in immunotechnology applications, including purification, immobilization, and detection of immunoglobulins. In this article, murine IgG₁, the primary isotype of monoclonal antibodies (mAbs) was used as target for selection of novel binders from a combinatorial ribosome display (RD) library of 10¹¹ affibody molecules. Four rounds of selection using three different mouse IgG₁ mAbs as alternating targets resulted in the identification of binders with broad mIgG₁ recognition and dissociation constants (K(D)) in the low nanomolar to low micromolar range. For one of the binders, denoted Z(mab25), competition in binding to full length mIgG₁ by a streptococcal protein G (SPG) fragment and selective affinity capture of mouse IgG₁ Fab fragments after papain cleavage of a full mAb suggest that an epitope functionally overlapping with the SPG-binding site in the CH₁ domain of mouse IgG₁ had been addressed. Interestingly, biosensor-based binding experiments showed that neither human IgG₁ nor bovine Ig, the latter present in fetal bovine serum (FBS) was recognized by Z(mab25). This selective binding profile towards murine IgG₁ was successfully exploited in species selective recovery of two different mouse mAbs from complex samples containing FBS, resembling a hybridoma culture supernatant.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antibodies, Monoclonal / chemistry
  • Antibodies, Monoclonal / isolation & purification
  • Antibodies, Monoclonal / metabolism*
  • Binding Sites, Antibody
  • Biosensing Techniques
  • Blotting, Western
  • Cattle
  • Chromatography, Affinity
  • Combinatorial Chemistry Techniques
  • Electrophoresis, Polyacrylamide Gel
  • Humans
  • Immunoglobulin Fab Fragments / chemistry
  • Immunoglobulin Fab Fragments / metabolism*
  • Immunoglobulin G / chemistry
  • Immunoglobulin G / metabolism*
  • Immunosorbent Techniques
  • Mice
  • Models, Genetic
  • Molecular Sequence Data
  • Papain
  • Protein Binding
  • Protein Engineering / methods*
  • Recombinant Fusion Proteins / chemistry
  • Recombinant Fusion Proteins / metabolism*
  • Ribosomes / metabolism
  • Species Specificity

Substances

  • Antibodies, Monoclonal
  • Immunoglobulin Fab Fragments
  • Immunoglobulin G
  • Recombinant Fusion Proteins
  • Papain