Redox cycling amplified electrochemical detection of DNA hybridization: application to pathogen E. coli bacterial RNA

Anal Chim Acta. 2011 Mar 9;689(1):29-33. doi: 10.1016/j.aca.2011.01.014. Epub 2011 Jan 18.

Abstract

An electrochemical genosensor in which signal amplification is achieved using p-aminophenol (p-AP) redox cycling by nicotinamide adenine dinucleotide (NADH) is presented. An immobilized thiolated capture probe is combined with a sandwich-type hybridization assay, using biotin as a tracer in the detection probe, and streptavidin-alkaline phosphatase as reporter enzyme. The phosphatase liberates the electrochemical mediator p-AP from its electrically inactive phosphate derivative. This generated p-AP is electrooxidized at an Au electrode modified self-assembled monolayer to p-quinone imine (p-QI). In the presence of NADH, p-QI is reduced back to p-AP, which can be re-oxidized on the electrode and produce amplified signal. A detection limit of 1 pM DNA target is offered by this simple one-electrode, one-enzyme format redox cycling strategy. The redox cycling design is applied successfully to the monitoring of the 16S rRNA of E. coli pathogenic bacteria, and provides a detection limit of 250 CFU μL(-1).

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alkaline Phosphatase / chemistry
  • Aminophenols / chemistry*
  • Benzoquinones / chemistry
  • Biosensing Techniques / methods*
  • Biotin / chemistry
  • DNA / analysis
  • DNA / chemistry
  • Electrodes
  • Enzymes, Immobilized / chemistry
  • Escherichia coli / isolation & purification*
  • Gold / chemistry
  • Imines / chemistry
  • Limit of Detection
  • NAD / chemistry*
  • Nucleic Acid Hybridization / methods
  • Oxidation-Reduction
  • RNA, Bacterial / analysis*
  • Streptavidin / chemistry
  • Sulfur Compounds / chemistry

Substances

  • Aminophenols
  • Benzoquinones
  • Enzymes, Immobilized
  • Imines
  • RNA, Bacterial
  • Sulfur Compounds
  • NAD
  • 1,4-benzoquinoneimine
  • Biotin
  • Gold
  • DNA
  • Streptavidin
  • Alkaline Phosphatase
  • 4-aminophenol