Virtual screening for potential inhibitors of bacterial MurC and MurD ligases

J Mol Model. 2012 Mar;18(3):1063-72. doi: 10.1007/s00894-011-1139-8. Epub 2011 Jun 12.

Abstract

Mur ligases are bacterial enzymes involved in the cytoplasmic steps of peptidoglycan biosynthesis and are viable targets for antibacterial drug discovery. We have performed virtual screening for potential ATP-competitive inhibitors targeting MurC and MurD ligases, using a protocol of consecutive hierarchical filters. Selected compounds were evaluated for inhibition of MurC and MurD ligases, and weak inhibitors possessing dual inhibitory activity have been identified. These compounds represent new scaffolds for further optimisation towards multiple Mur ligase inhibitors with improved inhibitory potency.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate
  • Anti-Bacterial Agents / chemistry*
  • Bacterial Proteins / antagonists & inhibitors*
  • Binding, Competitive
  • Computer Simulation*
  • Drug Discovery / methods*
  • Ligases / antagonists & inhibitors*
  • Peptide Synthases / antagonists & inhibitors

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Adenosine Triphosphate
  • Ligases
  • Peptide Synthases
  • UDP-N-acetylmuramoylalanine-D-glutamate ligase