N-carbamylglutamate enhancement of ureagenesis leads to discovery of a novel deleterious mutation in a newly defined enhancer of the NAGS gene and to effective therapy

Hum Mutat. 2011 Oct;32(10):1153-60. doi: 10.1002/humu.21553. Epub 2011 Sep 9.

Abstract

N-acetylglutamate synthase (NAGS) catalyzes the conversion of glutamate and acetyl-CoA to NAG, the essential allosteric activator of carbamyl phosphate synthetase I, the first urea cycle enzyme in mammals. A 17-year-old female with recurrent hyperammonemia attacks, the cause of which remained undiagnosed for 8 years in spite of multiple molecular and biochemical investigations, showed markedly enhanced ureagenesis (measured by isotope incorporation) in response to N-carbamylglutamate (NCG). This led to sequencing of the regulatory regions of the NAGS gene and identification of a deleterious single-base substitution in the upstream enhancer. The homozygous mutation (c.-3064C>A), affecting a highly conserved nucleotide within the hepatic nuclear factor 1 (HNF-1) binding site, was not found in single nucleotide polymorphism databases and in a screen of 1,086 alleles from a diverse population. Functional assays demonstrated that this mutation decreases transcription and binding of HNF-1 to the NAGS gene, while a consensus HNF-1 binding sequence enhances binding to HNF-1 and increases transcription. Oral daily NCG therapy restored ureagenesis in this patient, normalizing her biochemical markers, and allowing discontinuation of alternate pathway therapy and normalization of her diet with no recurrence of hyperammonemia. Inc.

Publication types

  • Case Reports
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Alleles
  • Amino-Acid N-Acetyltransferase / genetics*
  • Base Sequence
  • Binding Sites
  • Cell Line, Tumor
  • Child
  • Enhancer Elements, Genetic*
  • Female
  • Gene Frequency
  • Glutamates / metabolism
  • Glutamates / therapeutic use*
  • Hep G2 Cells
  • Hepatocyte Nuclear Factor 1 / metabolism
  • Humans
  • Nucleotide Motifs
  • Polymorphism, Single Nucleotide
  • Sequence Alignment
  • Sequence Deletion*
  • Treatment Outcome
  • Urea Cycle Disorders, Inborn / drug therapy*
  • Urea Cycle Disorders, Inborn / genetics*
  • Urea Cycle Disorders, Inborn / metabolism

Substances

  • Glutamates
  • N-carbamylglutamate
  • Hepatocyte Nuclear Factor 1
  • Amino-Acid N-Acetyltransferase