De novo sequencing and assembly of the whole genome of Novosphingobium sp. strain PP1Y

V D'Argenio; M Petrillo; P Cantiello; B Naso; L Cozzuto; E Notomista; G Paolella; A Di Donato; F Salvatore

doi:10.1128/JB.05349-11

De novo sequencing and assembly of the whole genome of Novosphingobium sp. strain PP1Y

J Bacteriol. 2011 Aug;193(16):4296. doi: 10.1128/JB.05349-11. Epub 2011 Jun 17.

Authors

V D'Argenio¹, M Petrillo, P Cantiello, B Naso, L Cozzuto, E Notomista, G Paolella, A Di Donato, F Salvatore

Affiliation

¹ CEINGE-Biotecnologie Avanzate, Via Sergio Pansini 5, 80131 Naples, Italy.

Abstract

Novosphingobium sp. strain PP1Y is a marine bacterium specifically adapted to use fuels as an energy source. We sequenced and assembled its entire genome using the Roche 454 genome sequencer system, which led to the identification of two plasmids and one megaplasmid, besides a 3.9-Mb circular chromosome.

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Genome, Bacterial*
Molecular Sequence Data
Sphingomonadaceae / genetics*

Associated data

GENBANK/FR856859
GENBANK/FR856860
GENBANK/FR856861
GENBANK/FR856862