Evolving methods for single nucleotide polymorphism detection: Factor V Leiden mutation detection

J Clin Lab Anal. 2011;25(4):259-88. doi: 10.1002/jcla.20470.

Abstract

Background: The many techniques used to diagnose the Factor V Leiden (FVL) mutation, the most common hereditary hypercoagulation disorder in Eurasians, and the most frequently requested genetic test reflect the evolving strategies in protein and DNA diagnosis.

Methods: Here, molecular methods to diagnose the FVL mutation are discussed.

Results: Protein-based detection assays include the conventional functional activated protein C resistance coagulation test and the recently reported antibody-mediated sensor detection; and DNA-based assays include approaches that use electrophoretic fractionation e.g., restriction fragment length polymorphism, denaturing gradient gel electrophoresis, and single-stranded conformational PCR analysis, DNA hybridization (e.g., microarrays), DNA polymerase-based assays, e.g., extension reactions, fluorescence polarization template-directed dye-terminator incorporation, PCR assays (e.g., amplification-refractory mutation system, melting curve analysis using real-time quantitative PCR, and helicase-dependent amplification), DNA sequencing (e.g., direct sequencing, pyrosequencing), cleavase-based Invader assay and ligase-based assays (e.g., oligonucleotide ligation assay and ligase-mediated rolling circle amplification).

Conclusion: The method chosen by a laboratory to diagnose FVL not only depends on the available technical expertise and equipment, but also the type, variety, and extent of other genetic disorders being diagnosed.

MeSH terms

  • Blood Coagulation Tests
  • DNA Mutational Analysis / methods*
  • Factor V / genetics*
  • Humans
  • Immunoassay
  • Molecular Diagnostic Techniques / methods*
  • Mutation*
  • Oligonucleotide Array Sequence Analysis
  • Polymorphism, Restriction Fragment Length

Substances

  • factor V Leiden
  • Factor V