A gyrB-targeted PCR for rapid identification of Salmonella

Curr Microbiol. 2011 Nov;63(5):477-83. doi: 10.1007/s00284-011-0007-1. Epub 2011 Sep 3.

Abstract

Salmonella causes the majority of infections in humans and homeothermic animals. This article describes a specific polymerase chain reaction (PCR) method developed for a rapid identification of Salmonella. A gyrB-targeted species-specific primer pair, S-P-for (5'-GGT GGT TTC CGT AAA AGT A-3') and S-P-rev (5'-GAA TCG CCT GGT TCT TGC-3'), was successfully designed. PCR with all the Salmonella strains produced a 366- bp DNA fragment that was absent from all the non-Salmonella strains tested. The detection limit of the PCR was 0.01 ng with genomic DNA or 3.2 cells per assay. Good specificity was also demonstrated by fecal samples, from which only the gyrB gene of Salmonella was amplified. Using the culture-PCR method, 27 isolates on Salmonella-Shigella (SS) medium were rapidly identified as Salmonella, which was confirmed by the sequencing of the gyrB gene.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bacterial Proteins / genetics*
  • Bacterial Typing Techniques / methods*
  • DNA Gyrase / genetics*
  • Feces / microbiology
  • Humans
  • Molecular Sequence Data
  • Phylogeny
  • Polymerase Chain Reaction / methods*
  • Salmonella / classification
  • Salmonella / genetics
  • Salmonella / isolation & purification*
  • Salmonella Infections / microbiology
  • Salmonella Infections, Animal / microbiology

Substances

  • Bacterial Proteins
  • DNA Gyrase

Associated data

  • GENBANK/AB607965
  • GENBANK/AB607966
  • GENBANK/AB607967
  • GENBANK/AB607968
  • GENBANK/AB607969
  • GENBANK/AB607970
  • GENBANK/AB607971
  • GENBANK/AB607972
  • GENBANK/AB607973
  • GENBANK/AB607974
  • GENBANK/AB607975
  • GENBANK/AB607976
  • GENBANK/AB607977
  • GENBANK/AB607978
  • GENBANK/AB607979
  • GENBANK/AB607980
  • GENBANK/AB607981
  • GENBANK/AB607982
  • GENBANK/AB607983
  • GENBANK/AB607984
  • GENBANK/AB607985
  • GENBANK/AB607986
  • GENBANK/AB621372
  • GENBANK/AB621373
  • GENBANK/AB621374
  • GENBANK/AB621375
  • GENBANK/AB621376
  • GENBANK/AB621377
  • GENBANK/AB621378
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  • GENBANK/AB621380
  • GENBANK/AB621381
  • GENBANK/AB621382
  • GENBANK/AB621383
  • GENBANK/AB621384
  • GENBANK/AB621385
  • GENBANK/AB621386
  • GENBANK/AB621387
  • GENBANK/AB621388
  • GENBANK/AB621389
  • GENBANK/AB621390
  • GENBANK/AB621391
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  • GENBANK/AB621393
  • GENBANK/AB621394
  • GENBANK/AB621395
  • GENBANK/AB621396
  • GENBANK/AB621397
  • GENBANK/AB621398