Position 156 influences the peptide repertoire and tapasin dependency of human leukocyte antigen B*44 allotypes

Haematologica. 2012 Jan;97(1):98-106. doi: 10.3324/haematol.2011.046037. Epub 2011 Oct 11.

Abstract

Background: Polymorphic differences between donor and recipient human leukocyte antigen class I molecules can result in graft-versus-host disease due to distinct peptide presentation. As part of the peptide-loading complex, tapasin plays an important role in selecting peptides from the pool of potential ligands. Class I polymorphisms can significantly alter the tapasin-mediated interaction with the peptide-loading complex and although most class I allotypes are highly dependent upon tapasin, some are able to load peptides independently of tapasin. Several human leukocyte antigen B*44 allotypes differ exclusively at position 156 (B*44:02(156Asp), 44:03(156Leu), 44:28(156Arg), 44:35(156Glu)). From these alleles, only the high tapasin-dependency of human leukocyte antigen B*44:02 has been reported.

Design and methods: We investigated the influence of position 156 polymorphisms on both the requirement of tapasin for efficient surface expression of each allotype and their peptide features. Genes encoding human leukocyte antigen B*44 variants bearing all possible substitutions at position 156 were lentivirally transduced into human leukocyte antigen class I-negative LCL 721.221 cells and the tapasin-deficient cell line LCL 721.220.

Results: Exclusively human leukocyte antigen B*44:28(156Arg) was expressed on the surface of tapasin-deficient cells, suggesting that the remaining B*44/156 variants are highly tapasin-dependent. Our computational analysis suggests that the tapasin-independence of human leukocyte antigen B*44:28(156Arg) is a result of stabilization of the peptide binding region and generation of a more peptide receptive state. Sequencing of peptides eluted from human leukocyte antigen B*44 molecules by liquid chromatography-electrospray ionization-mass spectrometry (LTQ-Orbitrap) demonstrated that both B*44:02 and B*44:28 share the same overall peptide motif and a certain percentage of their individual peptide repertoires in the presence and/or absence of tapasin.

Conclusions: Here we report for the first time the influence of position 156 on the human leukocyte antigen/tapasin association. Additionally, the results of peptide sequencing suggest that tapasin chaperoning is needed to acquire peptides of unusual length.

MeSH terms

  • Alleles
  • Amino Acid Motifs / genetics
  • Amino Acid Sequence
  • Computational Biology / methods
  • Epitopes / chemistry
  • Epitopes / genetics
  • Gene Expression
  • Gene Silencing
  • HEK293 Cells
  • HLA-B44 Antigen / chemistry
  • HLA-B44 Antigen / genetics*
  • HLA-B44 Antigen / metabolism*
  • Humans
  • Membrane Transport Proteins / genetics
  • Membrane Transport Proteins / metabolism*
  • Peptides / genetics
  • Peptides / metabolism*
  • Polymorphism, Genetic
  • Protein Binding

Substances

  • Epitopes
  • HLA-B44 Antigen
  • Membrane Transport Proteins
  • Peptides
  • tapasin