Metabolic cycling without cell division cycling in respiring yeast

Proc Natl Acad Sci U S A. 2011 Nov 22;108(47):19090-5. doi: 10.1073/pnas.1116998108. Epub 2011 Nov 7.

Abstract

Despite rapid progress in characterizing the yeast metabolic cycle, its connection to the cell division cycle (CDC) has remained unclear. We discovered that a prototrophic batch culture of budding yeast, growing in a phosphate-limited ethanol medium, synchronizes spontaneously and goes through multiple metabolic cycles, whereas the fraction of cells in the G1/G0 phase of the CDC increases monotonically from 90 to 99%. This demonstrates that metabolic cycling does not require cell division cycling and that metabolic synchrony does not require carbon-source limitation. More than 3,000 genes, including most genes annotated to the CDC, were expressed periodically in our batch culture, albeit a mere 10% of the cells divided asynchronously; only a smaller subset of CDC genes correlated with cell division. These results suggest that the yeast metabolic cycle reflects a growth cycle during G1/G0 and explains our previous puzzling observation that genes annotated to the CDC increase in expression at slow growth.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Cell Division / physiology*
  • Gene Expression Profiling
  • Gene Expression Regulation, Fungal / physiology*
  • Genes, Fungal / genetics*
  • Metabolic Networks and Pathways / physiology*
  • Microarray Analysis
  • Oxygen Consumption / physiology
  • RNA, Messenger / analysis
  • Saccharomycetales / growth & development
  • Saccharomycetales / metabolism*

Substances

  • RNA, Messenger