Photoregulated gene expression may involve ubiquitous DNA binding proteins

EMBO J. 1990 Nov;9(11):3415-27. doi: 10.1002/j.1460-2075.1990.tb07549.x.

Abstract

Several promoter elements have previously been shown to influence the expression of the cab-E gene in Nicotiana plumbaginifolia. Here we demonstrate, by electrophoretic mobility shift and methylation interference assays, that a complex pattern of protein-DNA interactions characterizes this promoter. Among the multiple proteins identified, we focused on five different factors which either occupied important regulatory elements and/or were present in relatively large amounts in nuclear extracts. All of these proteins were distinguished on the basis of their recognition sequence and other biochemical parameters. One, GBF, interacted with a single sequence within the cab-E promoter homologous to the G-box found in many photoregulated and other plant promoters. A second factor, GA-1, bound to the GATA element which is located between the CAAT and TATA boxes of the cab-E and all other LHCII Type I CAB promoters. GA-1 also interacted in vitro with the I-boxes of the Arabidopsis rbcS-1A promoter and the as-2 site of the CaMV 35S promoter. Two other factors, GC-1 and AT-1, bound to multiple recognition sites localized within the GC-rich and AT-rich elements, respectively. GT-1, a protein which interacts with promoters of other light-regulated genes, bound to seven distinct sites distributed throughout the cab-E promoter.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Sequence
  • Chlorophyll / metabolism
  • Cloning, Molecular
  • DNA-Binding Proteins / physiology*
  • Gene Expression Regulation*
  • Light
  • Molecular Sequence Data
  • Nicotiana / genetics*
  • Nuclear Proteins / genetics
  • Plant Proteins / genetics*
  • Plants, Toxic*
  • Promoter Regions, Genetic
  • Regulatory Sequences, Nucleic Acid
  • Transcription Factors / physiology*

Substances

  • DNA-Binding Proteins
  • Nuclear Proteins
  • Plant Proteins
  • Transcription Factors
  • Chlorophyll