Lead optimization of 2-(piperidin-3-yl)-1H-benzimidazoles: identification of 2-morpholin- and 2-thiomorpholin-2-yl-1H-benzimidazoles as selective and CNS penetrating H₁-antihistamines for insomnia

Bioorg Med Chem Lett. 2012 Jan 1;22(1):421-6. doi: 10.1016/j.bmcl.2011.10.115. Epub 2011 Nov 15.

Abstract

The structure-activity relationships of 2-(piperidin-3-yl)-1H-benzimidazoles, 2-morpholine and 2-thiomorpholin-2-yl-1H-benzimidazoles are described. In the lead optimization process, the pK(a) and/or logP of benzimidazole analogs were reduced either by attachment of polar substituents to the piperidine nitrogen or incorporation of heteroatoms into the piperidine heterocycle. Compounds 9a and 9b in the morpholine series and 10g in the thiomorpholine series demonstrated improved selectivity and CNS profiles compared to lead compound 2 and these are potential candidates for evaluation as sedative hypnotics.

MeSH terms

  • Benzimidazoles / chemical synthesis*
  • Benzimidazoles / pharmacology
  • Central Nervous System / drug effects
  • Drug Design
  • ERG1 Potassium Channel
  • Electrophysiology / methods
  • Ether-A-Go-Go Potassium Channels / chemistry
  • Histamine H1 Antagonists / pharmacology*
  • Humans
  • Hypnotics and Sedatives / pharmacology
  • Inhibitory Concentration 50
  • Kinetics
  • Microsomes, Liver / drug effects
  • Models, Chemical
  • Morpholines / chemistry
  • Nitrogen / chemistry
  • Piperidines / chemistry
  • Receptors, Histamine H1 / chemistry
  • Sleep Initiation and Maintenance Disorders / drug therapy*
  • Structure-Activity Relationship

Substances

  • Benzimidazoles
  • ERG1 Potassium Channel
  • Ether-A-Go-Go Potassium Channels
  • Histamine H1 Antagonists
  • Hypnotics and Sedatives
  • Morpholines
  • Piperidines
  • Receptors, Histamine H1
  • Nitrogen