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, 28 (7), 1052-3

pymzML--Python Module for High-Throughput Bioinformatics on Mass Spectrometry Data

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pymzML--Python Module for High-Throughput Bioinformatics on Mass Spectrometry Data

Till Bald et al. Bioinformatics.

Abstract

Summary: pymzML is an extension to Python that offers (i) an easy access to mass spectrometry (MS) data that allows the rapid development of tools, (ii) a very fast parser for mzML data, the standard data format in MS and (iii) a set of functions to compare or handle spectra.

Availability and implementation: pymzML requires Python2.6.5+ and is fully compatible with Python3. The module is freely available on http://pymzml.github.com or pypi, is published under LGPL license and requires no additional modules to be installed.

Contact: christian@fufezan.net.

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