Roseomonas riguiloci sp. nov., isolated from wetland freshwater

Int J Syst Evol Microbiol. 2012 Dec;62(Pt 12):3024-3029. doi: 10.1099/ijs.0.036186-0. Epub 2012 Feb 3.

Abstract

A non-motile, coccobacillus-shaped and pink pigmented bacterium, designated strain 03SU10-P(T), was isolated from wetland freshwater (Woopo wetland, Republic of Korea). Cells were Gram reaction-negative and catalase- and oxidase-positive. The major fatty acids (>10% of total) were C(18:1)ω7c and summed feature 3 (iso-C(15:0) 2-OH and/or C(16:1)ω7c). The predominant respiratory lipoquinone was Q-10. The DNA G+C content was 68 mol%. The major polar lipids were phosphatidylethanolamine, phosphatidylcholine and an unknown aminolipid. Spermidine, putrescine and 1,3-diaminopropane were the major polyamines. A phylogenetic tree based on 16S rRNA gene sequence comparisons showed that strain 03SU10-P(T) formed an evolutionary lineage within the radiation enclosing the members of the genus Roseomonas. The nearest neighbour to the novel strain was Roseomonas stagni HS-69(T) (96.3% gene sequence similarity). The evidence provided by the polyphasic taxonomic approach used in this study indicated that strain 03SU10-P(T) could not be assigned to any recognized species; therefore a novel species is proposed, Roseomonas riguiloci sp. nov., with 03SU10-P(T) ( = KCTC 23339(T) = JCM 17520(T)) as the type strain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / genetics
  • Fatty Acids / analysis
  • Fresh Water / microbiology*
  • Methylobacteriaceae / classification*
  • Methylobacteriaceae / genetics
  • Methylobacteriaceae / isolation & purification
  • Molecular Sequence Data
  • Phylogeny*
  • Polyamines / analysis
  • Quinones / analysis
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Sequence Analysis, DNA
  • Wetlands*

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Polyamines
  • Quinones
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/HQ436503