Letter to the Editor: Characterization of a Grapevine Leafroll-Associated Virus 3 From India Showing Incongruence in Its Phylogeny

Virus Genes. 2012 Aug;45(1):195-200. doi: 10.1007/s11262-012-0752-7. Epub 2012 May 5.

Abstract

Survey conducted during 2010-2011 in the vineyards of Nashik and Pune regions of India revealed the association of an Ampelovirus antigenically related to Grapevine leafroll-associated virus 3 (GLRaV-3) with seven cultivars of grapevine. Upon sequencing of the coat protein (CP) and partial heat shock protein 70 homologue (HSP70h) genes of GLRaV-3 present in the cultivar Cabernet Souvignon showed distinct grouping behaviour. It clustered in group 2 and group 1 on the basis of CP and HSP70h sequences, respectively. Incongruent clustering pattern observed on the basis of two genomic regions suggest that GLRaV-3 is a distinct isolate from India.

Publication types

  • Letter

MeSH terms

  • Capsid Proteins / genetics
  • Closteroviridae / classification
  • Closteroviridae / genetics*
  • Closteroviridae / isolation & purification
  • HSP70 Heat-Shock Proteins / genetics
  • India
  • Phylogeny*
  • Plant Diseases / virology*
  • Satellite Viruses / genetics*
  • Satellite Viruses / isolation & purification
  • Sequence Analysis, DNA
  • Vitis / virology*

Substances

  • Capsid Proteins
  • HSP70 Heat-Shock Proteins